Gut microbiome-mediated epigenetic regulation of brain disorder and application of machine learning for multi-omics data analysis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-07-04
Tag
- paper_reviews 6
- Articles 4
- bioinformatics 4
- single cell 4
- neuroscience 3
- scRNA-seq 3
- single cell transcriptomics 2
- brain 2
- coffee 2
- ubuntu 2
- large language model 2
- COVID-19 1
- endocrine 1
- viriology 1
- others 1
- others2 1
- GSK3 1
- population_genetics 1
- GWAS 1
- bcftools 1
- chemiosmosis 1
- respiration 1
- WNT_signaling 1
- glioblastoma 1
- QC 1
- AI in healthcare 1
- medical AI 1
- veterinary informatics 1
- multiple sclerosis 1
- gut microbiome 1
- specialty coffee 1
- DIKW model 1
- linux 1
- log monitoring 1
- spatial omics 1
- genetics 1
- veterinary AI 1
- Evo 1
- machine learning 1
- scikit-learn 1
- GeneTrajectory 1
- perturb-seq 1
- population genetics 1
- V2G2P 1
- ssGSEA 1
- crewAI 1
- stock analysis 1
- CellRank2 1
- gene expression regulation 1
- nvidia 1
- nvidia driver 1
paper_reviews
Effect of stress on brain inflammation and multiple sclerosis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-05-21
WNT signaling in glioblastoma and therapeutic opportunities
this is the re-uploaded version of my previous Naver Blog Posting at 2022-04-30
Chemiosmotic coupling in oxidative and photosynthetic phosphorylation
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-31
GSK3 signalling in neural development
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-15
Targeting androgen regulation of TMPRSS2 and ACE2 as a therapeutic strategy to combat COVID-19
this is the re-uploaded version of my previous Naver Blog Posting at 2022-02-25
Articles
WNT signaling in glioblastoma and therapeutic opportunities
this is the re-uploaded version of my previous Naver Blog Posting at 2022-04-30
Chemiosmotic coupling in oxidative and photosynthetic phosphorylation
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-31
GSK3 signalling in neural development
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-15
Targeting androgen regulation of TMPRSS2 and ACE2 as a therapeutic strategy to combat COVID-19
this is the re-uploaded version of my previous Naver Blog Posting at 2022-02-25
bioinformatics
[scRNA-seq] Introducing ddqc (data-driven quality control) for effective Quality Control
ddqc is a method proposed in the paper published in Genome Biology for performing quality control (QC) on scRNA-seq data in a way that accounts for biologica...
[scRNA-seq] Barnyard (multi-species) scRNA-seq with 10X Chromium: classifying species-specific barcode reads
I am currently conducting research with patient-derived xenograft (PDX). (host = mouse, graft = human)
single cell
CellRank 2: A Unified Framework for Single-Cell Fate Mapping
CellRank 2: Revolutionizing Single-Cell Trajectory Analysis
[Paper review] Unraveling the Genetic Complexity of Coronary Artery Disease: A New Approach Linking Variants to Genes to Pathways
In a groundbreaking study published in Nature, Schnitzler et al. introduce a novel approach called Variant-to-Gene-to-Program (V2G2P) to systematically link ...
[scRNA-seq] GeneTrajectory: unraveling gene expression dynamics for single-cell analysis
In a recent study published in Nature Biotechnology, Qu et al. introduce GeneTrajectory, a novel computational method for analyzing single-cell RNA sequencin...
neuroscience
Gut microbiome-mediated epigenetic regulation of brain disorder and application of machine learning for multi-omics data analysis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-07-04
Effect of stress on brain inflammation and multiple sclerosis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-05-21
GSK3 signalling in neural development
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-15
scRNA-seq
[scRNA-seq] ssGSEA with escape R package in Seurat v3 and later versions - troubleshooting
The most recent version of Seurat is v5.1.0
[scRNA-seq] Introducing ddqc (data-driven quality control) for effective Quality Control
ddqc is a method proposed in the paper published in Genome Biology for performing quality control (QC) on scRNA-seq data in a way that accounts for biologica...
[scRNA-seq] Barnyard (multi-species) scRNA-seq with 10X Chromium: classifying species-specific barcode reads
I am currently conducting research with patient-derived xenograft (PDX). (host = mouse, graft = human)
single cell transcriptomics
[scRNA-seq] Introducing ddqc (data-driven quality control) for effective Quality Control
ddqc is a method proposed in the paper published in Genome Biology for performing quality control (QC) on scRNA-seq data in a way that accounts for biologica...
[scRNA-seq] Barnyard (multi-species) scRNA-seq with 10X Chromium: classifying species-specific barcode reads
I am currently conducting research with patient-derived xenograft (PDX). (host = mouse, graft = human)
brain
Gut microbiome-mediated epigenetic regulation of brain disorder and application of machine learning for multi-omics data analysis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-07-04
Effect of stress on brain inflammation and multiple sclerosis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-05-21
coffee
Why I Love Specialty Coffee
1. What is Specialty Coffee?
ubuntu
[Linux Server] Troubleshooting NVIDIA Driver/Library Version Mismatch Error (Without Rebooting)
When dealing with NVIDIA driver issues, rebooting your system is often the simplest and most effective solution. However, in many real-world scenarios, espec...
[Linux Server] Monitoring and Logging User Commands in Bash with Telegram Bot
In this blog post, we’ll dive into a Bash script that enables you to monitor and log user commands executed in the terminal and send real-time notifications ...
large language model
[My study] Application of Large Language Models in Developing Pet-Companion-Friendly Veterinary Services
2024-04-25 Korean Society of Veterinary Science (KSVS) conference poster presentation
COVID-19
Targeting androgen regulation of TMPRSS2 and ACE2 as a therapeutic strategy to combat COVID-19
this is the re-uploaded version of my previous Naver Blog Posting at 2022-02-25
endocrine
Targeting androgen regulation of TMPRSS2 and ACE2 as a therapeutic strategy to combat COVID-19
this is the re-uploaded version of my previous Naver Blog Posting at 2022-02-25
viriology
Targeting androgen regulation of TMPRSS2 and ACE2 as a therapeutic strategy to combat COVID-19
this is the re-uploaded version of my previous Naver Blog Posting at 2022-02-25
others
Hello World!
toc test toc test print("Hello, World!")
others2
Hello World!
toc test toc test print("Hello, World!")
GSK3
GSK3 signalling in neural development
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-15
population_genetics
GWAS
bcftools
chemiosmosis
Chemiosmotic coupling in oxidative and photosynthetic phosphorylation
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-31
respiration
Chemiosmotic coupling in oxidative and photosynthetic phosphorylation
this is the re-uploaded version of my previous Naver Blog Posting at 2022-03-31
WNT_signaling
WNT signaling in glioblastoma and therapeutic opportunities
this is the re-uploaded version of my previous Naver Blog Posting at 2022-04-30
glioblastoma
WNT signaling in glioblastoma and therapeutic opportunities
this is the re-uploaded version of my previous Naver Blog Posting at 2022-04-30
QC
[scRNA-seq] Introducing ddqc (data-driven quality control) for effective Quality Control
ddqc is a method proposed in the paper published in Genome Biology for performing quality control (QC) on scRNA-seq data in a way that accounts for biologica...
AI in healthcare
[Medical AI] Empowering Physicians to Build Their Own Machine Learning Models
The rapid integration of machine learning (ML) into healthcare has brought forth a new era of possibilities for patient care and medical research. However, t...
medical AI
[Medical AI] Empowering Physicians to Build Their Own Machine Learning Models
The rapid integration of machine learning (ML) into healthcare has brought forth a new era of possibilities for patient care and medical research. However, t...
veterinary informatics
Veterinary Informatics: an Introduction
Veterinary informatics, the application of biomedical informatics techniques to veterinary data, has the potential to revolutionize both animal and human hea...
multiple sclerosis
Effect of stress on brain inflammation and multiple sclerosis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-05-21
gut microbiome
Gut microbiome-mediated epigenetic regulation of brain disorder and application of machine learning for multi-omics data analysis
this is the re-uploaded version of my previous Naver Blog Posting at 2022-07-04
specialty coffee
Why I Love Specialty Coffee
1. What is Specialty Coffee?
DIKW model
Understanding the DIKW Model: From Data to Wisdom
Introduction
linux
[Linux Server] Monitoring and Logging User Commands in Bash with Telegram Bot
In this blog post, we’ll dive into a Bash script that enables you to monitor and log user commands executed in the terminal and send real-time notifications ...
log monitoring
[Linux Server] Monitoring and Logging User Commands in Bash with Telegram Bot
In this blog post, we’ll dive into a Bash script that enables you to monitor and log user commands executed in the terminal and send real-time notifications ...
spatial omics
Back to top ↑genetics
Back to top ↑veterinary AI
[My study] Application of Large Language Models in Developing Pet-Companion-Friendly Veterinary Services
2024-04-25 Korean Society of Veterinary Science (KSVS) conference poster presentation
Evo
Back to top ↑machine learning
Back to top ↑scikit-learn
Back to top ↑GeneTrajectory
[scRNA-seq] GeneTrajectory: unraveling gene expression dynamics for single-cell analysis
In a recent study published in Nature Biotechnology, Qu et al. introduce GeneTrajectory, a novel computational method for analyzing single-cell RNA sequencin...
perturb-seq
[Paper review] Unraveling the Genetic Complexity of Coronary Artery Disease: A New Approach Linking Variants to Genes to Pathways
In a groundbreaking study published in Nature, Schnitzler et al. introduce a novel approach called Variant-to-Gene-to-Program (V2G2P) to systematically link ...
population genetics
[Paper review] Unraveling the Genetic Complexity of Coronary Artery Disease: A New Approach Linking Variants to Genes to Pathways
In a groundbreaking study published in Nature, Schnitzler et al. introduce a novel approach called Variant-to-Gene-to-Program (V2G2P) to systematically link ...
V2G2P
[Paper review] Unraveling the Genetic Complexity of Coronary Artery Disease: A New Approach Linking Variants to Genes to Pathways
In a groundbreaking study published in Nature, Schnitzler et al. introduce a novel approach called Variant-to-Gene-to-Program (V2G2P) to systematically link ...
ssGSEA
[scRNA-seq] ssGSEA with escape R package in Seurat v3 and later versions - troubleshooting
The most recent version of Seurat is v5.1.0
crewAI
Building a Sophisticated Stock Analysis Bot with CrewAI and Telegram
In today’s fast-paced financial markets, having access to comprehensive and timely stock analysis is crucial for making informed investment decisions. This b...
stock analysis
Building a Sophisticated Stock Analysis Bot with CrewAI and Telegram
In today’s fast-paced financial markets, having access to comprehensive and timely stock analysis is crucial for making informed investment decisions. This b...
CellRank2
CellRank 2: A Unified Framework for Single-Cell Fate Mapping
CellRank 2: Revolutionizing Single-Cell Trajectory Analysis
gene expression regulation
Gene Expression Regulation: A Comprehensive Guide
Gene Expression Regulation: A Comprehensive Guide
nvidia
[Linux Server] Troubleshooting NVIDIA Driver/Library Version Mismatch Error (Without Rebooting)
When dealing with NVIDIA driver issues, rebooting your system is often the simplest and most effective solution. However, in many real-world scenarios, espec...
nvidia driver
[Linux Server] Troubleshooting NVIDIA Driver/Library Version Mismatch Error (Without Rebooting)
When dealing with NVIDIA driver issues, rebooting your system is often the simplest and most effective solution. However, in many real-world scenarios, espec...